NYU Professor Michael Purugganan presented at KAUST's 2014 Winter Enrichment Program (WEP 2014) on the origins of crop species. He discussed how genome sequencing is improving our understanding of crop evolution, using date fruits collected in Jeddah as an example. His research on rice showed that two varieties, japonica and indica, share a single common ancestor, contrary to previous assumptions. Why it matters: Understanding crop evolution can help adapt crops to changing environments, which is crucial for food security in regions like the Middle East.
KAUST's Professor Carlos Duarte contributed to sequencing the genome of Zostera marina (eelgrass), work published in Nature. The research identifies gene loss and adaptation mechanisms related to the plant's transition from land to marine environments. Eelgrass developed salt resistance, which could inform selective breeding for salt-tolerant food crops. Why it matters: Understanding the eelgrass genome can help in conservation efforts and provide insights into plant adaptation to climate change and marine environments.
KAUST researchers have published a study in Nature Genetics detailing genomic analysis of wild rice relatives. The study examined nine tetraploid and two diploid wild relatives of rice, finding significant genetic diversity due to transposable elements. This diversity includes genes that confer resilience to heat, drought, and salinity. Why it matters: These findings can help improve rice yields, introduce rice cultivation to currently untenable regions, and protect rice crops against climate change, especially in the Middle East.
KAUST researchers have developed a genomic resource for Tausch’s goatgrass (Aegilops tauschii), a wild relative of wheat, by creating 46 high-quality genome assemblies. They compiled 493 genetically distinct accessions from an initial 900, collaborating with the Open Wild Wheat Consortium to select accessions with traits of interest, such as disease resistance and stress tolerance. Screening these assemblies helped identify rust resistance genes, including mapping a stem rust resistance gene to the Sr33 locus. Why it matters: This genomic resource will accelerate gene discovery in wheat, potentially improving modern wheat varieties and enhancing global food security.
KAUST professors Samir Hamdan and Nina Fedoroff collaborated on research published in Nucleic Acids Research focusing on microRNA (miRNA) biogenesis in plants. The study examined miRNA production in Arabidopsis thaliana and found that the protein SERRATE (SE) is integral to the processing of pri-miRNA by DCL1. They characterized the interactions of SE with RNA and DCL1, elucidating the mechanism by which SE promotes DCL1 activity. Why it matters: Understanding miRNA biogenesis could help modify crop plants to better tolerate stressful conditions, potentially increasing crop yields and productivity in the region.
KAUST Professor Takashi Gojobori has been elected as a Fellow of the International Society for Computational Biology (ISCB). ISCB is a scholarly society for computational biology and bioinformatics. Gojobori's research interests include comparative genomics and gene expression of neural cells, as well as the marine metagenomics of microorganisms. Why it matters: The recognition highlights KAUST's contributions to computational biology and bioinformatics and strengthens its position as a research hub in the region.