MBZUAI researchers collaborated with Carnegie Mellon University and the Broad Institute of MIT and Harvard to develop a new statistical method for analyzing data used for gene regulatory network inference. The method addresses the challenge of distinguishing true zero expression values from dropouts in single-cell RNA sequencing data. This research will be presented at the Twelfth International Conference on Learning Representations (ICLR 2024). Why it matters: Improving gene regulatory network inference can lead to better understanding of disease mechanisms and inform the development of new medicines.
KAUST's Environmental Epigenetics Program (KEEP), led by Prof. Valerio Orlando, focuses on understanding how cells acquire and maintain memory, particularly in response to environmental factors. The research investigates the role of non-coding RNA and chromosomal components in regulating gene expression beyond the DNA sequence. Epigenetics explains how the same genome can be interpreted differently, allowing cells and organs to adapt to changing conditions. Why it matters: This research could provide insights into how environmental factors impact gene expression and cell function, potentially leading to advances in understanding and treating diseases.
A KAUST team developed piRNAi, a gene-silencing tool in nematode worms using synthetic RNA sequences interacting with the piRNA pathway. They successfully silenced genes involved in sex determination and other functions, demonstrating multiplexed gene silencing. The gene silencing lasted for varying durations across generations, up to six generations. Why it matters: This expands the molecular toolkit for gene manipulation and offers potential therapeutic applications in humans, given the presence of the same gene-silencing pathway.
KAUST and EPFL Blue Brain Project researchers propose a new theory about a 'secret language' used by cells for internal communication regarding the external world. Using a computational model, they suggest that metabolic pathways can code details about neuromodulators that stimulate energy consumption. The model focuses on astrocytes and their cooperation with neurons in fueling the brain. Why it matters: This suggests a new avenue for understanding information processing in the brain and how cells contribute to the energy efficiency of brains compared to computers.
This article discusses a talk by Gábor Lugosi on "network archaeology," specifically the problems of root finding and broadcasting in large networks. The talk addresses discovering the past of dynamically growing networks when only a present-day snapshot is observed. Lugosi's research interests include machine learning theory, nonparametric statistics, and random structures. Why it matters: Understanding the evolution and origins of networks is crucial for various applications, including analyzing social networks, biological systems, and the spread of information.